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Using the algebra of hypergraph for reconstruction phylogenetic trees
(Maltepe Üniversitesi, 2009) Astuti, Mulia; Dr. Irawati; Muchtadi-Alamsyah, Intan; Muchlis, Ahmad; Muliana, Achirul Akbar; Halim, A.
In this paper, we will construct phylogenetic trees by using the algebra of hypergraph through Neighbor Joining Algorithm. Directed hypergraph can represent metabolic networks M(X,), where X is the set of metabolites and is the set of chemistry reactions. Metabolic network datas are obtained from citric-acid cycle of microorganism of 3 classes, which are 4 Archea, 11 Bacteria and 1 Eukaryote. Moreover, the result will be compared to the phylogenetic tree based on nucleotide sequences of 16s rRNA Gene of the same microorganisms.